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Why “Healthy” Foods Still Make You Bloated (And What to Do Instead)

Dr. Heather surrounded with healthy foods

Ever felt betrayed by a salad?
You’re not alone.

Back in college, I ate a giant, colorful salad every day—raw kale, crunchy peppers, chickpeas, carrots, you name it. It was textbook “healthy eating,” and I was deep in my nutrition program, following the advice to “eat the rainbow.

But after every lunch, I was so bloated I could barely sit through class. My stomach felt like it had its own pulse, and I couldn’t figure out why. I was doing everything right, so why did I feel so wrong?

What I didn’t realize then (and what most of my clients don’t realize when they come to me now) is this:

The problem isn’t always what you’re eating. It’s how well your body can actually digest it.

Let’s break down why healthy food can still make you bloated—and what you can do about it. If you’ve ever wondered “Why can’t I tolerate fiber?” or “How do you stop bloating from fiber?” you’re in the right place.


1. Raw Veggies and Fiber Overload

Raw vegetables and high-fiber foods are often the first thing people add when trying to eat “cleaner.” But raw fiber is tough. It takes a strong digestive system to break it down properly.

If your gut is sluggish, this can feel like tossing bricks into your belly. Hello, bloating.

What helps:
To eat fiber without bloating, try lightly cooking your veggies, especially cruciferous ones like kale, broccoli, and cauliflower. Think sautéed, steamed, or roasted instead of raw. Your gut will thank you.


2. Too Much Fiber, Too Fast

When you go from low-fiber (think: packaged, processed foods) to high-fiber overnight—your gut panics. Even if you’re feeding the right bacteria, your system may not be ready for the sudden influx of roughage.

The result? Gas, bloating, and a very unhappy gut.

What helps:
To stop bloating from fiber, increase fiber gradually—aim to add just 5 grams per day over time, and make sure to drink plenty of water to keep things moving. You don’t have to go from zero to chia-pudding overnight.


3. Imbalanced Gut Bacteria

When you suddenly increase fiber—especially prebiotic-rich foods like garlic, onions, beans, and certain veggies—you’re feeding gut bacteria.

Sounds good, right?
Not if the wrong bacteria are in charge.

In cases of dysbiosis (gut bacterial imbalance) or overgrowths like SIBO, even the healthiest foods can cause fermentation, gas, and bloating.

What helps:
Gut testing can reveal bacterial imbalances, and in some cases, a “weed and seed” approach may be necessary to reduce overgrowths of unwanted bacteria. But rather than strict elimination diets, I prefer a “low and slow” strategy—focusing on cooked, easy-to-digest foods while gradually building digestive strength. The key is not just elimination—but healing and supporting long-term resilience.


4. Poor Digestion (Especially Low Stomach Acid and Enzymes)

If your stomach acid is low, your food sits too long and ferments—especially protein-rich meals and tough fibers. If your pancreas isn’t producing enough enzymes, food doesn’t get broken down fully.

This leads to bloating, gas, and that heavy, uncomfortable feeling after meals.

What helps:
Support digestion from the top down:

  • Slow down and chew thoroughly. Digestion starts in the mouth.
  • Consider digestive bitters or apple cider vinegar before meals to support stomach acid.
  • Digestive enzymes can be a game changer for some—especially if your bloating happens after high-protein or high-fat meals.

I talk more about this in my free training Gut Bootcamp (click here to enroll for free!)


5. Slow Gut Motility

If things are sluggish and your bowels aren’t moving daily, all that fiber can sit and ferment. That fermentation creates gas and pressure, especially in the small intestine.

What helps:
Start to support motility with:

  • Gentle movement (like post-meal walks)
  • Magnesium citrate or glycinate
  • Ginger or prokinetics
  • Regular meals and consistent hydration
  • Working on the nervous system (like vagus nerve activation) is also key if motility is chronically slow.

6. Excess Histamine or Salicylate Sensitivity

Certain high-fiber foods (like spinach, avocado, strawberries, fermented foods) are also high in histamines or salicylates, which can trigger symptoms in people with impaired detoxification or enzyme deficiencies (like low DAO enzyme).

Symptoms might feel like bloating, flushing, fatigue, or brain fog—not always obvious gut symptoms. Yes, you can be sensitive to fiber in certain cases.

What helps:
Identify patterns in food reactions, and work with a practitioner to reduce histamine load and support detox pathways if this seems like a fit.


7. Leaky Gut & Gut Inflammation

When the gut lining is inflamed or compromised (from food sensitivities, stress, medications, etc.), even healthy fiber can feel abrasive. Certain fibers like inulin or wheat bran can aggravate an already sensitive lining.

What helps:
Focus on soothing, healing foods (think bone broth, well-cooked veggies, zinc, glutamine) and remove common gut irritants while healing.


Bottom Line: It’s Not the Kale’s Fault

If you’ve “cleaned up” your diet and still feel bloated, gassy, or miserable, it doesn’t mean you’re broken—or that you need to cut out more foods. It just means your digestion needs a little support.

Let’s stop blaming healthy foods and start healing the system that’s supposed to process them.


Enroll in gut bootcamp–my free training that teachesyou how to identify the cause symptoms, run the right tests, and support digestion from the top down—so you can eat real food again without fear of bloating.

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Hi, I’m Dr. Heather

Registered dietitian and helps people struggling with bloating, constipation, and IBS find relief from their symptoms and feel excited about food again.

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